Šablona:SARS-CoV-2 fylogenetika

Z Wikipedie, otevřené encyklopedie

Fylogenetický strom SARS-CoV-2 a příbuzných koronavirů založený na sekvenci celého genomu je následující:[1][2]

SARS‑CoV‑2 příbuzné koronaviry
 

(netopýří) Rc-o319, 81% k SARS-CoV-2, Rhinolophus cornutus, Iwate, Japonsko[3]

 
 
 
 

netopýří SL-ZXC21, 88% k SARS-CoV-2, Rhinolophus pusillus, Čou-šan, Čína[4]

 
 

netopýří SL-ZC45, 88% k SARS-CoV-2, Rhinolophus pusillus, Čou-šan, Čína[4]

 
 
 
 

luskouní SARSr-CoV-GX, 89% k SARS-CoV-2, Manis javanica, propašovaný z Jihovýchodní Asie[5]

 
 
 

luskouní SARSr-CoV-GD, 91% k SARS-CoV-2, Manis javanica, propašovaný z Jihovýchodní Asie[6]

 
 
 
 

netopýří RshSTT182, 92.6% k SARS-CoV-2, Rhinolophus shameli, Styng Tréng, Kambodža[7]

 
 

netopýří RshSTT200, 92.6% to SARS-CoV-2, Rhinolophus shameli, Styng Tréng, Kambodža[7]

 
 
 
 

(netopýří) RacCS203, 91.5% k SARS-CoV-2, Rhinolophus acuminatus, Chachoengsao, Thajsko[2]

 
 

(netopýří) RmYN02, 93.3% k SARS-CoV-2, Rhinolophus malayanus, Jün-nan, Čína[8]

 
 
 

(netopýří) RpYN06, 94.4% k SARS-CoV-2, Rhinolophus pusillus, Jün-nan, Čína[1]

 
 
 

(netopýří) RaTG13, 96.1% k SARS-CoV-2, Rhinolophus affinis, Mo-ťiang, Čína

 
 

SARS-CoV-2

 
 
 
 
 
 
 
 

SARS-CoV, 79% k SARS-CoV-2

 


References[editovat zdroj]

  1. ↑ a b Zhou H, Ji J, Chen X, Bi Y, Li J, Wang Q, Hu T, Song H, Zhao R, Chen Y, Cui M, Zhang Y, Hughes AC, Holmes EC, Shi W. Identification of novel bat coronaviruses sheds light on the evolutionary origins of SARS-CoV-2 and related viruses. Cell. June 2021, s. 4380–4391.e14. DOI 10.1016/j.cell.2021.06.008. PMID 34147139. 
  2. ↑ a b Wacharapluesadee S, Tan CW, Maneeorn P, Duengkae P, Zhu F, Joyjinda Y, Kaewpom T, Chia WN, Ampoot W, Lim BL, Worachotsueptrakun K, Chen VC, Sirichan N, Ruchisrisarod C, Rodpan A, Noradechanon K, Phaichana T, Jantarat N, Thongnumchaima B, Tu C, Crameri G, Stokes MM, Hemachudha T, Wang LF. Evidence for SARS-CoV-2 related coronaviruses circulating in bats and pangolins in Southeast Asia. Nature Communications. February 2021, s. 972. DOI 10.1038/s41467-021-21240-1. PMID 33563978. Bibcode 2021NatCo..12..972W. 
  3. ↑ Murakami S, Kitamura T, Suzuki J, Sato R, Aoi T, Fujii M, Matsugo H, Kamiki H, Ishida H, Takenaka-Uema A, Shimojima M, Horimoto T. Detection and Characterization of Bat Sarbecovirus Phylogenetically Related to SARS-CoV-2, Japan. Emerging Infectious Diseases. December 2020, s. 3025–3029. DOI 10.3201/eid2612.203386. PMID 33219796. 
  4. ↑ a b Zhou H, Chen X, Hu T, Li J, Song H, Liu Y, Wang P, Liu D, Yang J, Holmes EC, Hughes AC, Bi Y, Shi W. A Novel Bat Coronavirus Closely Related to SARS-CoV-2 Contains Natural Insertions at the S1/S2 Cleavage Site of the Spike Protein. Current Biology. June 2020, s. 2196–2203.e3. DOI 10.1016/j.cub.2020.05.023. PMID 32416074. 
  5. ↑ Lam TT, Jia N, Zhang YW, Shum MH, Jiang JF, Zhu HC, Tong YG, Shi YX, Ni XB, Liao YS, Li WJ, Jiang BG, Wei W, Yuan TT, Zheng K, Cui XM, Li J, Pei GQ, Qiang X, Cheung WY, Li LF, Sun FF, Qin S, Huang JC, Leung GM, Holmes EC, Hu YL, Guan Y, Cao WC. Identifying SARS-CoV-2-related coronaviruses in Malayan pangolins. Nature. July 2020, s. 282–285. DOI 10.1038/s41586-020-2169-0. PMID 32218527. S2CID 214683303. Bibcode 2020Natur.583..282L. 
  6. ↑ Liu P, Jiang JZ, Wan XF, Hua Y, Li L, Zhou J, Wang X, Hou F, Chen J, Zou J, Chen J. Are pangolins the intermediate host of the 2019 novel coronavirus (SARS-CoV-2)?. PLOS Pathogens. May 2020, s. e1008421. DOI 10.1371/journal.ppat.1008421. PMID 32407364. 
  7. ↑ a b Hul V, Delaune D, Karlsson EA, Hassanin A, Tey PO, Baidaliuk A, Gámbaro F, Tu VT, Keatts L, Mazet J, Johnson C. A novel SARS-CoV-2 related coronavirus in bats from Cambodia.Chybí název periodika! 26 January 2021. 
  8. ↑ Zhou H, Chen X, Hu T, Li J, Song H, Liu Y, Wang P, Liu D, Yang J, Holmes EC, Hughes AC, Bi Y, Shi W. A Novel Bat Coronavirus Closely Related to SARS-CoV-2 Contains Natural Insertions at the S1/S2 Cleavage Site of the Spike Protein. Current Biology. June 2020, s. 2196–2203.e3. DOI 10.1016/j.cub.2020.05.023. PMID 32416074. 

Citováno z „https://cs.wikipedia.org/w/index.php?title=Šablona:SARS-CoV-2_fylogenetika&oldid=20715651“